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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922956.1_cds_XP_016471695.1_64002
CDS Infomation

[gene=LOC107793771] [db_xref=GeneID:107793771] [protein=potassium channel KAT3-like] [frame=2] [partial=5'] [protein_id=XP_016471695.1] [location=complement(join(5539..5677,5947..6037,7093..7147,8664..8732,8954..9139,10435..10467,10542..10640,10736..10975,11084..11401,11478..11535,11662..11823,13719..>13934))] [gbkey=CDS]
Sequence

ATATGGCAAACATTTTGGGTGGTATTGGTAGCATACTCAGGATGGTCATCCCCTTTCGAG
TTGGCATTCAAGAAGGTAGCCGTTGAAGGCCTTTTGCCTCTTGATATAGTGGTCGATGCC
TCCTTCGCCATTGACATTCTTCTCACTTTCTTTGTCGCTTACTCGGACAAATCCACTTAT
TTACTCGTTGATGATCATAAGAAAATTGCTTTCAGGTATGTCATTCATCTAGGGTTCCCA
ATGGATGTTGCATCAACCGTACCATTTCAAACCATATTCCGGATCTTTGACGGGAAGAAG
CAAGGAGAAGATGTTTTTGGCTTCCTAAACTTGCTCAGACTTTGGCGACTACGGCGTGTT
AATAAATTCTTCTCAAGGCTAGAGAAGGACATTCGGTTCAGCTACTTCTGGACAAGATTC
TGTAAACTAATTTGTATGACCTTATTCGCTGTGCATTCCGTTGGCTGTTTATATTACTGG
CTAGCAACTCATTATCATACTGCAGAGAATACCTGGATTGGATCAAATGTTACTAATTTC
CAAGAAAGAAGTATCTCTCTAGGATACACATATTCCATGTATTGGTCTGTTGCTACCCTC
ACCACGGTTGGCTACGGTGATCTTCGTGCACATAATACAGGAGAGAAGATTTTCTCCATC
TTCTACATGTTTTTCAACATTGGCCTCACTGCTTACTTAATTGGCAACATGACCAATCTT
ATTGTCCATGGCATTGCTCGAACTTTCGCAATGCGGGACGCCATCAATAAGACAGTGAGA
TATGCAAGCAAGAATATACTTCCAGAAGGCATAAAAGAGCAAGTTCTGGCACATTTGACT
CTCAAATTCAGGACTGCAGAACTACAGCAAGAGGAAGTAATTGGAGACTTGCCCAAAGCA
ATAAGATGTAGCATTGCGCAATATCTTTTCCATACAACACTTGAAAATACCTACCTTTTA
AAAGGGGTTTCTGAAGATTTCTTAGTCCAGTTGGTTTCCGAGATAAAAGCAGAATACTTT
CCACCAAAAGTTGACATTGTTATTCAAAATGATATACCAACAGATTTCTATATTGTTGTC
TCTGGAGCTGTGGAAGTGGTTACATACAAGAATGGAATGGAACAGTTCCTGTCAAAGTTG
GAATCCCCAGGATTGTTCGGGGAAGTAGGTGTTATCTTTAATATGCCCCAGCCTTTCACC
GTGAGAAGTAAGAGGTTTTCTCAGGTTGTTCGAATCAGCCATCATCATTTCAAGCAACTG
CTGCAGCCACTTAACGCAGATGGAAAGATAATCCTCTCCAATTTTCTTCAGCATCTGAAA
GGAATGGAAAGGGAAGAGATACCACTCATATCAGAGCTGCTCAGTGACCTGAAAAGTGAG
GTGGGTACAGTGAGTAGGAGACAAAATCATGAAGGACAAAGCCAAGATGGAAATAAGAAA
AGGTTTGGCAAAAGAGGAAGTAAAATTCTCATGGCAAATGGCTCCCAAATGGAGGATTTG
GGCGCTTTACAGGAAAATGATCACTTGCCTCGGTGCTTCACCATGAGAGCTTCCTCCGAT
ACCGAAATCAACCAGCTCGAGTTCGAGCTCAAAGATCAGGTCTGGAAAAAAGACATGTAC
AGGCTCCTTAGTGAGCAAAAGGACGGGGCCGTCAAAGACCTCTAG

Peptide Sequence

PEP ID

XP_016471695.1
PEP Infomation

PREDICTED: potassium channel KAT3-like, partial [Nicotiana tabacum]
Sequence

IWQTFWVVLVAYSGWSSPFELAFKKVAVEGLLPLDIVVDASFAIDILLTFFVAYSDKSTY
LLVDDHKKIAFRYVIHLGFPMDVASTVPFQTIFRIFDGKKQGEDVFGFLNLLRLWRLRRV
NKFFSRLEKDIRFSYFWTRFCKLICMTLFAVHSVGCLYYWLATHYHTAENTWIGSNVTNF
QERSISLGYTYSMYWSVATLTTVGYGDLRAHNTGEKIFSIFYMFFNIGLTAYLIGNMTNL
IVHGIARTFAMRDAINKTVRYASKNILPEGIKEQVLAHLTLKFRTAELQQEEVIGDLPKA
IRCSIAQYLFHTTLENTYLLKGVSEDFLVQLVSEIKAEYFPPKVDIVIQNDIPTDFYIVV
SGAVEVVTYKNGMEQFLSKLESPGLFGEVGVIFNMPQPFTVRSKRFSQVVRISHHHFKQL
LQPLNADGKIILSNFLQHLKGMEREEIPLISELLSDLKSEVGTVSRRQNHEGQSQDGNKK
RFGKRGSKILMANGSQMEDLGALQENDHLPRCFTMRASSDTEINQLEFELKDQVWKKDMY
RLLSEQKDGAVKDL

Transcript Sequence

Gene sequence data has not been registered.